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Transcriptional regulator BRCA1
Vertebrate gene cluster 1996032. 1 members
Xtr
1
Classification
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KOG Classes:
INFORMATION STORAGE AND PROCESSING
[ K ]
: Transcription
INFORMATION STORAGE AND PROCESSING
[ L ]
: Replication, recombination and repair
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BLAST for similar clusters
Find all clusters with selected gene(s):
Xtr
197687
Find vertebrate clusters with selected annotation(s):
PTHR13763
PF00533
PF00097
KOG4362
Cluster gene display:
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Location
Identifier
Symbol
Defline
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Sequence:
Cluster member sequences
Cluster consensus sequence
Raw CLUSTALW alignment
Type:
Peptide
Nucleotide
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Genes in this cluster
Functional Analysis
Multiple Sequence Alignment
Org
Chrom
DbXref
Symbol
Defline
Domains
Synteny
Xtr
scaffold_29
197687
brca1
breast cancer 1, early onset
PF00097
: Zinc finger, C3HC4 type (RING finger) (19 - 60)
PF00533
: BRCA1 C Terminus (BRCT) domain (1378 - 1459)
PF00533
: BRCA1 C Terminus (BRCT) domain (1492 - 1575)
1589
close
267120
is a member of
Cluster 1984317
: Acyl-CoA thioesterase
close
267170
is a member of
Cluster 1996087
: Troponin C2, fast (Trembl v26)
close
449610
is a member of
Cluster 1995229
: Hypothetical protein zgc:109913 (Trembl v4)
close
292005
is a member of
Cluster 1979729
: Ubiquitin-conjugating enzyme (EC 6.3.2.19) (Ubiquitin carrier protein)...
close
157604
is a member of
Cluster 1982608
: Neighbor of BRCA1 gene 1 (Fragment) (Trembl v3)
close
197687
is a member of
Cluster 1996032
: Transcriptional regulator BRCA1
close
147198
is a member of
Cluster 2021188
: Predicted quinone oxidoreductase
close
463159
is a member of
Cluster 2008585
: uncharacterized
close
62827
is a member of
Cluster 2026954
: uncharacterized
ID
Type
Description
Xtr
Oth
PTHR13763
PANTHER
BREAST CANCER TYPE 1 SUSCEPTIBILITY PROTEIN BRCA1
ALL
x
PF00533
PFAM
BRCA1 C Terminus (BRCT) domain
ALL
x
PF00097
PFAM
Zinc finger, C3HC4 type (RING finger)
ALL
x
KOG4362
KOG
Transcriptional regulator BRCA1
ALL
x
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