Metazome: Search results

8753 clusters found

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Search term: transcription
Search type: Ontology [ pfam ]
Search node: All nodes

63 ontologies searched

ID	Type	Description
PF05793	PFAM	transcription initiation factor iif, alpha subunit (tfiif-alpha)
PF00352	PFAM	transcription factor tfiid (or tata-binding protein, tbp)
PF05327	PFAM	rna polymerase i specific transcription initiation factor rrn3
PF05236	PFAM	transcription initiation factor tfiid component taf4 family
PF05349	PFAM	gata-type transcription activator, n-terminal
PF04761	PFAM	lactococcus bacteriophage putative transcription regulator
PF03540	PFAM	transcription initiation factor tfiid 23-30kda subunit
PF03529	PFAM	otx1 transcription factor
PF00808	PFAM	histone-like transcription factor (cbf/nf-y) and archaeal histone
PF02751	PFAM	transcription initiation factor iia, gamma subunit, beta-barrel domain
PF06445	PFAM	bacterial transcription activator, effector binding domain
PF01272	PFAM	prokaryotic transcription elongation factor, grea/greb, c-terminal domain
PF01096	PFAM	transcription factor s-ii (tfiis)
PF04947	PFAM	poxvirus late transcription factor vltf3 like
PF04441	PFAM	poxvirus early transcription factor (vetf), large subunit
PF03153	PFAM	transcription factor iia, alpha/beta subunit
PF04704	PFAM	zfx / zfy transcription activation region
PF08618	PFAM	transcription factor opi1
PF06137	PFAM	transcription elongation factor a, sii-related family
PF04516	PFAM	cp2 transcription factor
PF03299	PFAM	transcription factor ap-2
PF04589	PFAM	rfx1 transcription activation region
PF04621	PFAM	pea3 subfamily ets-domain transcription factor n terminal domain
PF08601	PFAM	transcription factor pap1
PF00605	PFAM	interferon regulatory factor transcription factor
PF07073	PFAM	modulator of rho-dependent transcription termination (rof)
PF05129	PFAM	transcription elongation factor elf1 like
PF02467	PFAM	transcription factor whib
PF03850	PFAM	transcription factor tfb4
PF00859	PFAM	ctf/nf-i family transcription modulation region
PF03634	PFAM	tcp family transcription factor
PF05397	PFAM	transcription regulatory protein gal11
PF03294	PFAM	rna polymerase-associated transcription specificity factor, rap94
PF08536	PFAM	plant transcription factor
PF00170	PFAM	bzip transcription factor
PF06546	PFAM	vertebrate heat shock transcription factor
PF06093	PFAM	transcription elongation protein spt4
PF06529	PFAM	vertebrate interleukin-3 regulated transcription factor
PF02045	PFAM	ccaat-binding transcription factor (cbf-b/nf-ya) subunit b
PF08474	PFAM	myelin transcription factor 1
PF05718	PFAM	poxvirus intermediate transcription factor
PF00319	PFAM	srf-type transcription factor (dna-binding and dimerisation domain)
PF02200	PFAM	ste like transcription factor
PF04082	PFAM	fungal specific transcription factor domain
PF00382	PFAM	transcription factor tfiib repeat
PF02291	PFAM	transcription initiation factor iid, 31kd subunit
PF03847	PFAM	transcription initiation factor tfiid subunit a
PF02269	PFAM	transcription initiation factor iid, 18kd subunit
PF06331	PFAM	transcription factor tfiih complex subunit tfb5
PF07704	PFAM	rv0623-like transcription factor
PF02268	PFAM	transcription initiation factor iia, gamma subunit, helical domain
PF07544	PFAM	rna polymerase ii transcription mediator
PF03333	PFAM	adhesin biosynthesis transcription regulatory protein
PF03849	PFAM	transcription factor tfb2
PF02357	PFAM	transcription termination factor nusg
PF03131	PFAM	bzip maf transcription factor
PF03957	PFAM	jun-like transcription factor
PF07500	PFAM	transcription factor s-ii (tfiis), central domain
PF02270	PFAM	transcription initiation factor iif, beta subunit
PF03514	PFAM	gras family transcription factor
PF03326	PFAM	herpesvirus transcription activation factor (transactivator)
PF06881	PFAM	rna polymerase ii transcription factor siii (elongin) subunit a
PF03449	PFAM	prokaryotic transcription elongation factor, grea/greb, n-terminal domain

SIZE	NODE	DESCRIPTION	Hsa	Mmu	Rno	Cfa	Mdo	Gga	Xtr	Gac	Ola	Tru	Dre	Cin	Csa	Bfl	Spu	Dme	Aga	Aae	Bmo	Tca	Cel	Cbr	Lgi	Nve	Oth
433	Eumetazoan	Hypothetical gene (#1257663)	25	25	25	23	23	21	19	28	23	27	30	13	12	24	8	11	12	12	10	11	11	10	17	13	x
410	Bilaterian	Hypothetical gene (#768277)	25	25	25	23	23	21	19	28	23	27	30	13	11	20	7	10	11	11	10	10	11	10	17	-	x
256	Eumetazoan	LOC407663 protein (Fragment) (Trembl v27...	6	8	8	9	8	6	9	19	14	15	21	9	7	35	10	10	8	11	6	9	8	8	6	6	x
242	Eumetazoan	Hypothetical gene (#1414573)	8	8	9	8	7	7	8	8	10	11	10	6	3	14	11	17	15	23	15	18	6	6	8	6	x
236	Bilaterian	Cardiac and skeletal muscle-specific BOP...	8	8	9	8	7	7	8	8	10	11	10	6	3	14	11	17	15	23	15	18	6	6	8	-	x
234	Eumetazoan	Hypothetical gene (#1249087)	13	12	13	13	11	11	14	18	17	20	22	5	5	9	5	5	6	7	8	3	4	3	6	4	x
230	Bilaterian	Disks large-associated protein 2 (DAP-2)...	13	12	13	13	11	11	14	18	17	20	22	5	5	9	5	5	6	7	8	3	4	3	6	-	x
176	Eumetazoan	Putative Metabotropic Glutamate Receptor...	8	8	8	7	7	8	10	18	16	15	16	4	3	12	5	2	1	1	2	4	3	3	8	7	x
169	Bilaterian	Putative Metabotropic Glutamate Receptor...	8	8	8	7	7	8	10	18	16	15	16	4	3	12	5	2	1	1	2	4	3	3	8	-	x
165	Eumetazoan	Hypothetical gene (#1282852)	9	10	8	10	9	7	9	8	8	9	9	6	5	8	6	5	7	5	4	5	5	5	4	4	x
161	Bilaterian	Hypothetical protein zgc:111958 (Trembl ...	9	10	8	10	9	7	9	8	8	9	9	6	5	8	6	5	7	5	4	5	5	5	4	-	x
142	Eumetazoan	Histone H2A (Fragment) (Trembl v30)	11	5	5	8	5	6	9	10	9	9	11	2	1	6	8	6	4	9	1	5	2	3	2	5	x
141	Eumetazoan	Hypothetical protein zgc:76986 (Trembl v...	8	9	8	9	9	9	12	12	11	12	16	3	2	15	2	-	-	-	-	-	-	-	2	2	x
136	Bilaterian	Histone H2A (Fragment) (Trembl v30)	11	5	5	7	5	6	9	10	9	9	11	2	1	6	8	6	4	9	1	5	2	3	2	-	x
134	Eumetazoan	Atf6 protein (Fragment) (Trembl v26)	5	6	7	7	6	4	6	7	7	4	6	2	2	7	3	7	8	8	10	7	2	2	7	4	x
130	Bilaterian	Hypothetical gene (#785777)	5	6	7	7	6	4	6	7	7	4	6	2	2	7	3	7	8	8	10	7	2	2	7	-	x
126	Eumetazoan	Hypothetical gene (#1249708)	9	7	6	6	8	6	6	5	5	8	7	3	3	7	3	4	4	4	4	4	4	4	5	4	x
122	Bilaterian	Hypothetical gene (#768058)	9	7	6	6	8	6	6	5	5	8	7	3	3	7	3	4	4	4	4	4	4	4	5	-	x
104	Eumetazoan	Hypothetical gene (#1250284)	5	6	4	2	4	3	4	4	5	4	4	6	3	7	6	5	3	4	2	4	5	4	3	7	x
103	Bilaterian	Hypothetical protein zgc:63500 (Interfer...	6	7	6	7	7	6	10	9	8	9	12	2	2	10	1	-	-	-	-	-	-	-	1	-	x
99	Eumetazoan	Tcfcp2l2 protein (P70 MGR) (Trembl v29)	6	6	6	7	7	6	6	7	6	7	8	3	1	3	1	3	2	3	3	2	1	1	2	2	x
97	Bilaterian	Tcfcp2l2 protein (P70 MGR) (Trembl v29)	6	6	6	7	7	6	6	7	6	7	8	3	1	3	1	3	2	3	3	2	1	1	2	-	x
97	Eumetazoan	Zgc:91840 (Trembl v28)	6	6	6	6	6	5	6	6	7	7	8	1	1	1	2	2	3	5	3	4	1	1	3	1	x
97	Eumetazoan	bZIP transcription factor MafK	7	7	7	5	7	4	3	7	9	6	11	3	2	3	2	3	1	2	2	1	-	-	2	3	x
96	Bilaterian	Zgc:91840 (Trembl v28)	6	6	6	6	6	5	6	6	7	7	8	1	1	1	2	2	3	5	3	4	1	1	3	-	x
96	Deuterostome	Histone H2A (Fragment) (Trembl v30)	10	4	3	6	5	6	7	10	9	9	10	2	1	6	8	-	-	-	-	-	-	-	-	-	x
94	Bilaterian	bZIP transcription factor MafK	7	7	7	5	7	4	3	7	9	6	11	3	2	3	2	3	1	2	2	1	-	-	2	-	x
93	Bilaterian	Hypothetical gene (#771754)	5	6	4	2	4	3	4	4	5	4	4	6	3	7	6	5	3	4	2	4	3	2	3	-	x
86	Eumetazoan	Histone H3 (Histone gene complex 1) (His...	3	4	3	7	5	6	3	3	7	4	2	2	4	5	5	3	3	3	2	1	3	2	2	4	x
84	Eumetazoan	Testis spermatogenesis apoptosis related...	4	4	4	4	5	3	4	6	6	5	7	2	2	4	4	2	2	4	2	3	1	1	2	3	x
82	Deuterostome	Interferon regulatory factor 5 variant 9...	4	5	5	5	6	5	7	7	7	7	10	2	2	9	1	-	-	-	-	-	-	-	-	-	x
82	Bilaterian	Histone H3 (Histone gene complex 1) (His...	3	4	3	7	5	6	3	3	7	4	2	2	4	5	5	3	3	3	2	1	3	2	2	-	x
81	Bilaterian	Testis spermatogenesis apoptosis related...	4	4	4	4	5	3	4	6	6	5	7	2	2	4	4	2	2	4	2	3	1	1	2	-	x
80	Deuterostome	Tcfcp2l2 protein (P70 MGR) (Trembl v29)	6	6	6	7	7	6	6	7	6	7	8	3	1	3	1	-	-	-	-	-	-	-	-	-	x
75	Eumetazoan	Hypothetical gene (#1273331)	3	3	4	3	3	3	2	3	3	3	4	5	2	4	2	3	4	3	2	3	3	3	4	3	x
75	Chordate	Histone H2A (Fragment) (Trembl v30)	10	4	3	6	5	6	6	8	9	8	7	2	1	-	-	-	-	-	-	-	-	-	-	-	x
72	Bilaterian	Hypothetical gene (#767335)	3	3	4	3	3	3	2	3	3	3	4	5	2	4	2	3	4	3	2	3	3	3	4	-	x
68	Eumetazoan	Hypothetical protein (Trembl v29)	5	5	5	5	5	5	5	5	4	6	5	2	-	1	1	1	1	1	1	1	1	1	1	1	x
67	Bilaterian	Hypothetical protein (Trembl v29)	5	5	5	5	5	5	5	5	4	6	5	2	-	1	1	1	1	1	1	1	1	1	1	-	x
67	Eumetazoan	Histone H4	1	10	6	6	1	5	3	2	5	1	1	1	5	2	1	5	1	1	1	1	1	1	5	1	x
66	Eumetazoan	Nuclear factor 1 (CCAAT-box binding tran...	4	4	4	4	4	3	6	4	6	5	4	2	1	4	1	1	1	1	1	1	1	1	2	1	x
66	Bilaterian	Histone H4	1	10	6	6	1	5	3	2	5	1	1	1	5	2	1	5	1	1	1	1	1	1	5	-	x
65	Bilaterian	Nuclear factor 1 (CCAAT-box binding tran...	4	4	4	4	4	3	6	4	6	5	4	2	1	4	1	1	1	1	1	1	1	1	2	-	x
61	Eumetazoan	Zgc:63903 (Trembl v27)	2	2	3	2	2	1	2	4	4	3	4	5	2	4	2	2	2	4	2	2	2	2	1	2	x
59	Eumetazoan	Jun B proto-oncogene, like (Trembl v26)	3	3	2	3	3	-	4	6	5	7	4	1	1	3	1	1	1	1	1	1	1	2	1	4	x
59	Deuterostome	Hypothetical protein (Trembl v29)	5	5	5	5	5	5	5	5	4	6	5	2	-	1	1	-	-	-	-	-	-	-	-	-	x
56	Bilaterian	Hypothetical protein (Fragment) (Trembl ...	2	2	3	2	2	1	2	4	4	3	4	5	1	4	1	2	2	4	1	2	2	2	1	-	x
56	Eumetazoan	Transcription elongation factor A (SII),...	4	4	5	3	8	2	2	3	3	3	4	1	1	3	1	1	1	1	1	1	1	1	1	1	x
56	Deuterostome	Nuclear factor 1 (CCAAT-box binding tran...	4	4	4	4	4	3	6	4	6	5	4	2	1	4	1	-	-	-	-	-	-	-	-	-	x
55	Bilaterian	Jun B proto-oncogene (Trembl v26)	3	3	2	3	3	-	4	6	5	7	4	1	1	3	1	1	1	1	1	1	1	2	1	-	x
54	Bilaterian	Transcription elongation factor A (SII),...	4	4	4	3	8	2	2	3	3	3	4	1	1	3	1	1	1	1	1	1	1	1	1	-	x
50	Eumetazoan	TATA-binding protein associated factor T...	3	2	1	2	3	3	2	4	5	5	2	2	1	4	1	1	1	1	1	1	1	2	1	1	x
50	Deuterostome	Hypothetical gene (#1112031)	4	4	3	2	5	3	5	3	4	5	4	2	2	3	1	-	-	-	-	-	-	-	-	-	x
50	Deuterostome	nuclear factor	4	4	4	4	2	2	4	5	4	5	6	1	1	2	2	-	-	-	-	-	-	-	-	-	x
49	Bilaterian	TATA-binding protein associated factor T...	3	2	1	2	3	3	2	4	5	5	2	2	1	4	1	1	1	1	1	1	1	2	1	-	x
49	Protostome	CG11160-PA, isoform A (Trembl v26)	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	9	7	8	8	7	3	3	4	-	x
49	Eumetazoan	Heat shock transcription factor	3	4	4	3	3	4	4	3	3	2	4	1	1	1	1	1	1	1	-	1	1	1	1	1	x
48	Bilaterian	Heat shock transcription factor	3	4	4	3	3	4	4	3	3	2	4	1	1	1	1	1	1	1	-	1	1	1	1	-	x
48	Eumetazoan	CAMP responsive element modulator varian...	3	4	3	3	3	3	3	4	2	4	5	1	1	-	1	1	1	-	1	1	1	1	1	1	x
47	Bilaterian	cAMP responsive element modulator	3	4	3	3	3	3	3	4	2	4	5	1	1	-	1	1	1	-	1

8753 clusters found

63 ontologies searched

Clusters retrieved: